STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRRS1Ferric chelate reductase 1. (523 aa)    
Predicted Functional Partners:
KDM6B
Lysine demethylase 6B.
   
 0.797
PDPK1
3-phosphoinositide dependent protein kinase 1.
    
 0.778
ENSCAPP00000015272
annotation not available
    
 0.770
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 0.768
MAPKAP1
MAPK associated protein 1.
    
 0.764
ATP5PD
ATP synthase peripheral stalk subunit d.
   
 0.743
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
   
 0.741
ENSCAPP00000010813
annotation not available
    
 0.739
PRKDC
Protein kinase, DNA-activated, catalytic subunit.
    
 0.739
MTOR
Mechanistic target of rapamycin kinase.
    
 0.739
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.