STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM2ALysine demethylase 2A. (1038 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
   
 0.999
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.993
ENSCAPP00000013913
annotation not available
    
 0.993
ENSCAPP00000011556
annotation not available
    
 0.992
RYBP
RING1 and YY1 binding protein.
    
 0.992
ENSCAPP00000009519
annotation not available
    
 0.991
ENSCAPP00000009463
annotation not available
    
 0.990
RING1
Ring finger protein 1.
    
 0.990
ENSCAPP00000018370
annotation not available
    
 0.990
KDM6B
Lysine demethylase 6B.
    
 0.985
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.