STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHBDL1Rhomboid like 1. (360 aa)    
Predicted Functional Partners:
ENSCAPP00000016609
annotation not available
      
 0.560
RHBDD1
Rhomboid domain containing 1.
      
 0.554
STOML1
Stomatin like 1.
  
 0.517
ENSCAPP00000008744
annotation not available
      
 0.516
PHB2
Prohibitin 2.
  
 0.515
STOM
Stomatin.
  
 0.477
STOML3
Stomatin like 3.
  
 0.477
NPHS2
NPHS2 stomatin family member, podocin.
  
 0.477
STOML2
Stomatin like 2.
  
 0.471
PHB
Prohibitin.
  
 0.471
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.