RHBDL1 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

RHBDL1

Rhomboid like 1. (360 aa)

Predicted Functional Partners:

ENSCAPP00000008920

0.762

ENSCAPP00000016609

0.757

ENSCAPP00000008744

0.674

MAGI2

0.631

TM7SF2

0.629

RHBDD1

0.536

ADAM10

0.530

ADAM17

0.525

WDR24

0.516

ENSCAPP00000003192

0.489

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADAM10	ADAM17	ENSCAPP00000003029	ENSCAPP00000003538	ADAM metallopeptidase domain 10.	ADAM metallopeptidase domain 17.	0.928
ADAM10	ENSCAPP00000016609	ENSCAPP00000003029	ENSCAPP00000016609	ADAM metallopeptidase domain 10.	annotation not available	0.507
ADAM10	RHBDL1	ENSCAPP00000003029	ENSCAPP00000005334	ADAM metallopeptidase domain 10.	Rhomboid like 1.	0.530
ADAM17	ADAM10	ENSCAPP00000003538	ENSCAPP00000003029	ADAM metallopeptidase domain 17.	ADAM metallopeptidase domain 10.	0.928
ADAM17	ENSCAPP00000016609	ENSCAPP00000003538	ENSCAPP00000016609	ADAM metallopeptidase domain 17.	annotation not available	0.507
ADAM17	RHBDL1	ENSCAPP00000003538	ENSCAPP00000005334	ADAM metallopeptidase domain 17.	Rhomboid like 1.	0.525
ENSCAPP00000003192	RHBDL1	ENSCAPP00000003192	ENSCAPP00000005334	annotation not available	Rhomboid like 1.	0.489
ENSCAPP00000003192	WDR24	ENSCAPP00000003192	ENSCAPP00000018421	annotation not available	WD repeat domain 24.	0.617
ENSCAPP00000008744	ENSCAPP00000008920	ENSCAPP00000008744	ENSCAPP00000008920	annotation not available	annotation not available	0.425
ENSCAPP00000008744	RHBDL1	ENSCAPP00000008744	ENSCAPP00000005334	annotation not available	Rhomboid like 1.	0.674
ENSCAPP00000008920	ENSCAPP00000008744	ENSCAPP00000008920	ENSCAPP00000008744	annotation not available	annotation not available	0.425
ENSCAPP00000008920	MAGI2	ENSCAPP00000008920	ENSCAPP00000010553	annotation not available	Membrane associated guanylate kinase, WW and PDZ domain containing 2.	0.919
ENSCAPP00000008920	RHBDL1	ENSCAPP00000008920	ENSCAPP00000005334	annotation not available	Rhomboid like 1.	0.762
ENSCAPP00000016609	ADAM10	ENSCAPP00000016609	ENSCAPP00000003029	annotation not available	ADAM metallopeptidase domain 10.	0.507
ENSCAPP00000016609	ADAM17	ENSCAPP00000016609	ENSCAPP00000003538	annotation not available	ADAM metallopeptidase domain 17.	0.507
ENSCAPP00000016609	RHBDL1	ENSCAPP00000016609	ENSCAPP00000005334	annotation not available	Rhomboid like 1.	0.757
MAGI2	ENSCAPP00000008920	ENSCAPP00000010553	ENSCAPP00000008920	Membrane associated guanylate kinase, WW and PDZ domain containing 2.	annotation not available	0.919
MAGI2	RHBDL1	ENSCAPP00000010553	ENSCAPP00000005334	Membrane associated guanylate kinase, WW and PDZ domain containing 2.	Rhomboid like 1.	0.631
RHBDD1	RHBDL1	ENSCAPP00000012886	ENSCAPP00000005334	Rhomboid domain containing 1.	Rhomboid like 1.	0.536
RHBDL1	ADAM10	ENSCAPP00000005334	ENSCAPP00000003029	Rhomboid like 1.	ADAM metallopeptidase domain 10.	0.530