Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FUCA2alpha-L-fucosidase 2. (392 aa)    
Predicted Functional Partners:
FUCA1
alpha-L-fucosidase 1.
   
  0.924
NAGA
alpha-N-acetylgalactosaminidase.
  
 
 0.871
ENSCAPP00000004692
annotation not available
      
 0.851
ENSCAPP00000004032
annotation not available
     
  0.831
AK2
Adenylate kinase 2.
      
 0.817
ACBD6
acyl-CoA binding domain containing 6.
      
 0.777
FAM20C
FAM20C golgi associated secretory pathway kinase.
     
  0.760
PGM1
Phosphoglucomutase 1.
      
 0.758
ADAT2
Adenosine deaminase tRNA specific 2.
      
 0.685
GBA3
Glucosylceramidase beta 3 (gene/pseudogene).
     
 0.672
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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