Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF114Ring finger protein 114. (192 aa)    
Predicted Functional Partners:
RNF166
Ring finger protein 166.
    
   0.915
DCAF11
DDB1 and CUL4 associated factor 11.
    
 0.906
TIPARP
TCDD inducible poly(ADP-ribose) polymerase.
    
   0.898
ENSCAPP00000015322
annotation not available
    
 
 0.871
TNKS
Tankyrase.
    
  0.802
ENSCAPP00000004807
annotation not available
    
 
 0.796
ZRANB1
Zinc finger RANBP2-type containing 1.
    
   0.785
ENSCAPP00000000972
annotation not available
    
  0.736
ENSCAPP00000008606
annotation not available
    
  0.736
CRBN
Cereblon.
    
 0.687
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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