Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SLCO1C1Solute carrier organic anion transporter family member 1C1. (580 aa)    
Predicted Functional Partners:
SLC16A10
Solute carrier family 16 member 10.
    
 0.803
DOP1B
DOP1 leucine zipper like protein B.
      
 0.688
SLC7A5
Solute carrier family 7 member 5.
      
 0.581
WDR19
WD repeat domain 19.
      
 0.574
ABCF1
ATP binding cassette subfamily F member 1.
      
 0.572
AQP4
Aquaporin 4.
   
  
 0.562
ENSCAPP00000013108
annotation not available
    
  0.545
EFCAB9
EF-hand calcium binding domain 9.
    
 0.545
ATP1A1
ATPase Na+/K+ transporting subunit alpha 1.
   
  
 0.542
ATP1A2
ATPase Na+/K+ transporting subunit alpha 2.
   
  
 0.542
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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