STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO1C1Solute carrier organic anion transporter family member 1C1. (580 aa)    
Predicted Functional Partners:
SLC16A10
Solute carrier family 16 member 10.
     
 0.677
ENSCAPP00000013108
annotation not available
    
  0.595
EFCAB9
EF-hand calcium binding domain 9.
    
 0.588
ENSCAPP00000006210
annotation not available
    
  0.575
TMEM262
Transmembrane protein 262.
    
  0.575
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
    
  0.559
SLC7A5
Solute carrier family 7 member 5.
      
 0.426
CACNA1I
Calcium voltage-gated channel subunit alpha1 I.
    
  0.403
CACNA1G
Calcium voltage-gated channel subunit alpha1 G.
    
  0.403
CACNA1H
Calcium voltage-gated channel subunit alpha1 H.
    
  0.403
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.