STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO48F-box protein 48. (155 aa)    
Predicted Functional Partners:
LIN54
Lin-54 DREAM MuvB core complex component.
      
 0.782
ECT2L
Epithelial cell transforming 2 like.
      
 0.748
SKP1
S-phase kinase associated protein 1.
    
 
 0.687
CNBP
CCHC-type zinc finger nucleic acid binding protein.
      
 0.679
ENSCAPP00000002861
annotation not available
      
 0.660
ENSCAPP00000006485
annotation not available
      
 0.660
CNRIP1
Cannabinoid receptor interacting protein 1.
      
 0.660
ANAPC15
Anaphase promoting complex subunit 15.
      
 0.582
E2F7
E2F transcription factor 7.
      
 0.573
DCUN1D2
Defective in cullin neddylation 1 domain containing 2.
      
 0.570
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.