Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD6CD6 molecule. (642 aa)    
Predicted Functional Partners:
ALCAM
Activated leukocyte cell adhesion molecule.
    
 0.999
CD247
CD247 molecule.
   
 
 0.986
CD3D
CD3d molecule.
   
 0.982
CD3E
CD3e molecule.
   
 
 0.982
CD3G
CD3g molecule.
   
 
 0.973
ZAP70
Zeta chain of T cell receptor associated protein kinase 70.
   
 0.961
SKAP1
Src kinase associated phosphoprotein 1.
   
 
 0.956
TRAT1
T cell receptor associated transmembrane adaptor 1.
   
 
 0.956
CD5
CD5 molecule.
  
 
0.950
SYK
Spleen associated tyrosine kinase.
   
 0.936
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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