STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PNKDPNKD metallo-beta-lactamase domain containing. (327 aa)    
Predicted Functional Partners:
ENSCAPP00000014917
annotation not available
    
 0.895
GLO1
Glyoxalase I.
  
 0.773
MCEE
methylmalonyl-CoA epimerase.
  
 0.741
LDHD
Lactate dehydrogenase D.
    
 0.737
ENSCAPP00000016963
annotation not available
      
 0.728
ENSCAPP00000009391
annotation not available
  
 0.719
GLOD4
Glyoxalase domain containing 4.
  
 0.702
ASIC4
Acid sensing ion channel subunit family member 4.
      
 0.690
TMEM25
Transmembrane protein 25.
      
 0.690
PARK7
Parkinsonism associated deglycase.
    
 0.687
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.