STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC4Armadillo repeat containing 4. (941 aa)    
Predicted Functional Partners:
TTC25
Tetratricopeptide repeat domain 25.
  
 0.994
ENSCAPP00000007846
annotation not available
   
 0.992
ENSCAPP00000015156
annotation not available
   
 0.989
CCDC151
Coiled-coil domain containing 151.
    
 0.988
ENSCAPP00000006984
annotation not available
  
 0.978
ENSCAPP00000006959
annotation not available
   
 
 0.949
DNAI2
Dynein axonemal intermediate chain 2.
   
 
 0.943
CCDC40
Coiled-coil domain containing 40.
   
 
 0.937
DRC1
Dynein regulatory complex subunit 1.
   
 
 0.936
RSPH1
Radial spoke head component 1.
   
 0.934
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.