STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPR162G protein-coupled receptor 162. (588 aa)    
Predicted Functional Partners:
USP5
Ubiquitin specific peptidase 5.
    
 
 0.761
ENSCAPP00000008160
annotation not available
   
 0.757
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.736
ENSCAPP00000001907
annotation not available
    
 0.719
ENSCAPP00000011960
annotation not available
    
 
 0.707
ENO2
Enolase 2.
   
 
 0.706
CLCN4
Chloride voltage-gated channel 4.
    
 
 0.695
CLCN3
Chloride voltage-gated channel 3.
    
 
 0.694
TMEM167A
Transmembrane protein 167A.
      
 0.690
LRRC23
Leucine rich repeat containing 23.
    
 0.675
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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