ENSCAPP00000005375 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCAPP00000005375

annotation not available (172 aa)

Predicted Functional Partners:

ENSCAPP00000016084

0.999

MRRF

0.993

MRPS16

0.982

MRPL19

0.981

PDCD11

0.976

MTIF2

0.973

ENSCAPP00000013732

0.968

RPS9

0.959

RPL35

0.956

GFM1

0.950

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000005375	ENSCAPP00000013732	ENSCAPP00000005375	ENSCAPP00000013732	annotation not available	annotation not available	0.968
ENSCAPP00000005375	ENSCAPP00000016084	ENSCAPP00000005375	ENSCAPP00000016084	annotation not available	annotation not available	0.999
ENSCAPP00000005375	GFM1	ENSCAPP00000005375	ENSCAPP00000002784	annotation not available	G elongation factor mitochondrial 1.	0.950
ENSCAPP00000005375	MRPL19	ENSCAPP00000005375	ENSCAPP00000016158	annotation not available	Mitochondrial ribosomal protein L19.	0.981
ENSCAPP00000005375	MRPS16	ENSCAPP00000005375	ENSCAPP00000014749	annotation not available	Mitochondrial ribosomal protein S16.	0.982
ENSCAPP00000005375	MRRF	ENSCAPP00000005375	ENSCAPP00000006851	annotation not available	Mitochondrial ribosome recycling factor.	0.993
ENSCAPP00000005375	MTIF2	ENSCAPP00000005375	ENSCAPP00000013598	annotation not available	Mitochondrial translational initiation factor 2.	0.973
ENSCAPP00000005375	PDCD11	ENSCAPP00000005375	ENSCAPP00000002433	annotation not available	Programmed cell death 11.	0.976
ENSCAPP00000005375	RPL35	ENSCAPP00000005375	ENSCAPP00000006561	annotation not available	Ribosomal protein L35.	0.956
ENSCAPP00000005375	RPS9	ENSCAPP00000005375	ENSCAPP00000012452	annotation not available	Ribosomal protein S9.	0.959
ENSCAPP00000013732	ENSCAPP00000005375	ENSCAPP00000013732	ENSCAPP00000005375	annotation not available	annotation not available	0.968
ENSCAPP00000013732	ENSCAPP00000016084	ENSCAPP00000013732	ENSCAPP00000016084	annotation not available	annotation not available	0.970
ENSCAPP00000013732	GFM1	ENSCAPP00000013732	ENSCAPP00000002784	annotation not available	G elongation factor mitochondrial 1.	0.913
ENSCAPP00000013732	MRPL19	ENSCAPP00000013732	ENSCAPP00000016158	annotation not available	Mitochondrial ribosomal protein L19.	0.995
ENSCAPP00000013732	MRPS16	ENSCAPP00000013732	ENSCAPP00000014749	annotation not available	Mitochondrial ribosomal protein S16.	0.999
ENSCAPP00000013732	MRRF	ENSCAPP00000013732	ENSCAPP00000006851	annotation not available	Mitochondrial ribosome recycling factor.	0.929
ENSCAPP00000013732	MTIF2	ENSCAPP00000013732	ENSCAPP00000013598	annotation not available	Mitochondrial translational initiation factor 2.	0.926
ENSCAPP00000013732	PDCD11	ENSCAPP00000013732	ENSCAPP00000002433	annotation not available	Programmed cell death 11.	0.979
ENSCAPP00000013732	RPL35	ENSCAPP00000013732	ENSCAPP00000006561	annotation not available	Ribosomal protein L35.	0.986
ENSCAPP00000013732	RPS9	ENSCAPP00000013732	ENSCAPP00000012452	annotation not available	Ribosomal protein S9.	0.997