STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005375annotation not available (172 aa)    
Predicted Functional Partners:
ENSCAPP00000016084
annotation not available
  
 0.999
PDCD11
Programmed cell death 11.
  
 
 0.989
MRRF
Mitochondrial ribosome recycling factor.
  
 
 0.986
MRPL19
Mitochondrial ribosomal protein L19.
  
 0.982
ENSCAPP00000013732
annotation not available
  
 
 0.981
MRPS16
Mitochondrial ribosomal protein S16.
  
 
 0.979
MRPS6
Mitochondrial ribosomal protein S6.
  
 
 0.977
MRPL21
Mitochondrial ribosomal protein L21.
  
 
 0.974
RPS9
Ribosomal protein S9.
  
  
 0.973
ENSCAPP00000016878
annotation not available
  
  
 0.973
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.