Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUL4ACullin 4A. (731 aa)    
Predicted Functional Partners:
DDB2
Damage specific DNA binding protein 2.
    
 0.999
DCAF1
DDB1 and CUL4 associated factor 1.
   
 0.999
RBX1
Ring-box 1.
    
 0.999
DCAF11
DDB1 and CUL4 associated factor 11.
    
 0.999
DDB1
Damage specific DNA binding protein 1.
   
 0.999
CRBN
Cereblon.
    
 0.999
TRPC4AP
Transient receptor potential cation channel subfamily C member 4 associated protein.
    
 0.998
ENSCAPP00000006310
annotation not available
    
 0.998
ENSCAPP00000008193
annotation not available
    
 0.998
DDA1
DET1 and DDB1 associated 1.
    
 0.998
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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