Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005401annotation not available (570 aa)    
Predicted Functional Partners:
WDR63
WD repeat domain 63.
    
 0.923
CFAP70
Cilia and flagella associated protein 70.
   
 0.902
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.878
CFAP58
Cilia and flagella associated protein 58.
    
 0.850
TTC21A
Tetratricopeptide repeat domain 21A.
   
 0.785
S100A1
S100 calcium binding protein A1.
    
  0.774
CFAP44
Cilia and flagella associated protein 44.
    
 0.759
S100A3
S100 calcium binding protein A3.
    
 0.758
ODF2
Outer dense fiber of sperm tails 2.
    
 0.738
TTC29
Tetratricopeptide repeat domain 29.
    
 
 0.718
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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