STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLFM1Olfactomedin 1. (435 aa)    
Predicted Functional Partners:
OLFM2
Olfactomedin 2.
  
 
0.855
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
 0.853
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
   
 0.829
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
  0.814
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
   
 0.812
SHISA6
Shisa family member 6.
   
  0.788
OLFM3
Olfactomedin 3.
    
 
0.781
ABHD6
Abhydrolase domain containing 6.
     
 0.767
CACNG4
Calcium voltage-gated channel auxiliary subunit gamma 4.
   
 
  0.761
VWC2L
Von Willebrand factor C domain containing 2 like.
   
 
  0.760
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.