Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005404annotation not available (156 aa)    
Predicted Functional Partners:
CBX1
Chromobox 1.
   
   0.950
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.945
E2F6
E2F transcription factor 6.
   
 0.944
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 0.931
TRIM28
Tripartite motif containing 28.
    
 0.930
ENSCAPP00000002246
annotation not available
   
 
 0.912
MGA
MAX dimerization protein MGA.
    
  0.898
POGZ
Pogo transposable element derived with ZNF domain.
    
 0.896
RYBP
RING1 and YY1 binding protein.
    
 0.895
RING1
Ring finger protein 1.
    
 0.885
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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