LAMA1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LAMA1

Laminin subunit alpha 1. (2965 aa)

Predicted Functional Partners:

LAMA2

0.941

ENSCAPP00000016591

0.939

ITGB1

0.938

LAMA5

0.937

ITGA6

0.937

ITGA7

0.936

LAMB1

0.935

LAMA3

0.935

ITGB4

0.934

ITGA3

0.928

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000016591	ITGA3	ENSCAPP00000016591	ENSCAPP00000001357	annotation not available	Integrin subunit alpha 3.	0.939
ENSCAPP00000016591	ITGA6	ENSCAPP00000016591	ENSCAPP00000005244	annotation not available	Integrin subunit alpha 6.	0.939
ENSCAPP00000016591	ITGA7	ENSCAPP00000016591	ENSCAPP00000008161	annotation not available	Integrin subunit alpha 7.	0.927
ENSCAPP00000016591	ITGB1	ENSCAPP00000016591	ENSCAPP00000000311	annotation not available	Integrin subunit beta 1.	0.983
ENSCAPP00000016591	ITGB4	ENSCAPP00000016591	ENSCAPP00000007470	annotation not available	Integrin subunit beta 4.	0.964
ENSCAPP00000016591	LAMA1	ENSCAPP00000016591	ENSCAPP00000005407	annotation not available	Laminin subunit alpha 1.	0.939
ENSCAPP00000016591	LAMA2	ENSCAPP00000016591	ENSCAPP00000011760	annotation not available	Laminin subunit alpha 2.	0.931
ENSCAPP00000016591	LAMA3	ENSCAPP00000016591	ENSCAPP00000012119	annotation not available	Laminin subunit alpha 3.	0.850
ENSCAPP00000016591	LAMA5	ENSCAPP00000016591	ENSCAPP00000000617	annotation not available	Laminin subunit alpha 5.	0.840
ENSCAPP00000016591	LAMB1	ENSCAPP00000016591	ENSCAPP00000001154	annotation not available	Laminin subunit beta 1.	0.853
ITGA3	ENSCAPP00000016591	ENSCAPP00000001357	ENSCAPP00000016591	Integrin subunit alpha 3.	annotation not available	0.939
ITGA3	ITGA6	ENSCAPP00000001357	ENSCAPP00000005244	Integrin subunit alpha 3.	Integrin subunit alpha 6.	0.932
ITGA3	ITGA7	ENSCAPP00000001357	ENSCAPP00000008161	Integrin subunit alpha 3.	Integrin subunit alpha 7.	0.925
ITGA3	ITGB1	ENSCAPP00000001357	ENSCAPP00000000311	Integrin subunit alpha 3.	Integrin subunit beta 1.	0.981
ITGA3	ITGB4	ENSCAPP00000001357	ENSCAPP00000007470	Integrin subunit alpha 3.	Integrin subunit beta 4.	0.977
ITGA3	LAMA1	ENSCAPP00000001357	ENSCAPP00000005407	Integrin subunit alpha 3.	Laminin subunit alpha 1.	0.928
ITGA3	LAMA2	ENSCAPP00000001357	ENSCAPP00000011760	Integrin subunit alpha 3.	Laminin subunit alpha 2.	0.946
ITGA3	LAMA3	ENSCAPP00000001357	ENSCAPP00000012119	Integrin subunit alpha 3.	Laminin subunit alpha 3.	0.909
ITGA3	LAMA5	ENSCAPP00000001357	ENSCAPP00000000617	Integrin subunit alpha 3.	Laminin subunit alpha 5.	0.895
ITGA3	LAMB1	ENSCAPP00000001357	ENSCAPP00000001154	Integrin subunit alpha 3.	Laminin subunit beta 1.	0.877