STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMA1Laminin subunit alpha 1. (2965 aa)    
Predicted Functional Partners:
LAMC1
Laminin subunit gamma 1.
   
 0.985
ENSCAPP00000016591
annotation not available
    
 0.952
LAMB1
Laminin subunit beta 1.
     
 0.950
LAMB3
Laminin subunit beta 3.
     
 0.947
NTN4
Netrin 4.
     
 0.946
ITGA6
Integrin subunit alpha 6.
    
 0.945
ITGB4
Integrin subunit beta 4.
    
 0.945
ITGA7
Integrin subunit alpha 7.
    
 0.945
ITGA1
Integrin subunit alpha 1.
    
 0.945
ITGB1
Integrin subunit beta 1.
    
 0.940
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.