STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GNPTGN-acetylglucosamine-1-phosphate transferase subunit gamma. (246 aa)    
Predicted Functional Partners:
GNPTAB
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.
    
 0.999
GANAB
Glucosidase II alpha subunit.
   
 0.989
NAGPA
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
     
 0.902
CANX
Calnexin.
   
 0.851
ZPLD1
Zona pellucida like domain containing 1.
    
 
 0.840
ENSCAPP00000001068
annotation not available
   
 0.743
ENSCAPP00000002965
annotation not available
   
 
  0.682
SLC3A1
Solute carrier family 3 member 1.
   
 
  0.682
ENSCAPP00000002674
annotation not available
   
 
  0.679
ENSCAPP00000017451
annotation not available
   
 
  0.679
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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