Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEX16Peroxisomal biogenesis factor 16. (328 aa)    
Predicted Functional Partners:
ENSCAPP00000010317
annotation not available
    
 0.998
PEX3
Peroxisomal biogenesis factor 3.
   
 0.995
PEX12
Peroxisomal biogenesis factor 12.
     
 0.925
PEX13
Peroxisomal biogenesis factor 13.
     
 0.919
PEX14
Peroxisomal biogenesis factor 14.
    
 0.908
PEX2
Peroxisomal biogenesis factor 2.
     
 0.894
ABCD3
ATP binding cassette subfamily D member 3.
     
 0.879
PEX26
Peroxisomal biogenesis factor 26.
     
 0.853
PEX6
Peroxisomal biogenesis factor 6.
     
 0.847
PXMP2
Peroxisomal membrane protein 2.
   
 
 0.833
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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