PEX16 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PEX16

Peroxisomal biogenesis factor 16. (328 aa)

Predicted Functional Partners:

ENSCAPP00000010317

0.973

PEX3

0.908

PEX14

0.867

PEX12

0.856

PEX13

0.851

ABCD3

0.837

SLC25A17

0.811

PEX2

0.799

ENSCAPP00000006113

0.793

ACBD5

0.782

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCD3	ACBD5	ENSCAPP00000004093	ENSCAPP00000008795	ATP binding cassette subfamily D member 3.	acyl-CoA binding domain containing 5.	0.672
ABCD3	ENSCAPP00000006113	ENSCAPP00000004093	ENSCAPP00000006113	ATP binding cassette subfamily D member 3.	annotation not available	0.694
ABCD3	ENSCAPP00000010317	ENSCAPP00000004093	ENSCAPP00000010317	ATP binding cassette subfamily D member 3.	annotation not available	0.950
ABCD3	PEX12	ENSCAPP00000004093	ENSCAPP00000009748	ATP binding cassette subfamily D member 3.	Peroxisomal biogenesis factor 12.	0.806
ABCD3	PEX13	ENSCAPP00000004093	ENSCAPP00000004053	ATP binding cassette subfamily D member 3.	Peroxisomal biogenesis factor 13.	0.851
ABCD3	PEX14	ENSCAPP00000004093	ENSCAPP00000008933	ATP binding cassette subfamily D member 3.	Peroxisomal biogenesis factor 14.	0.807
ABCD3	PEX16	ENSCAPP00000004093	ENSCAPP00000005414	ATP binding cassette subfamily D member 3.	Peroxisomal biogenesis factor 16.	0.837
ABCD3	PEX2	ENSCAPP00000004093	ENSCAPP00000013113	ATP binding cassette subfamily D member 3.	Peroxisomal biogenesis factor 2.	0.789
ABCD3	PEX3	ENSCAPP00000004093	ENSCAPP00000001898	ATP binding cassette subfamily D member 3.	Peroxisomal biogenesis factor 3.	0.911
ABCD3	SLC25A17	ENSCAPP00000004093	ENSCAPP00000002109	ATP binding cassette subfamily D member 3.	Solute carrier family 25 member 17.	0.761
ACBD5	ABCD3	ENSCAPP00000008795	ENSCAPP00000004093	acyl-CoA binding domain containing 5.	ATP binding cassette subfamily D member 3.	0.672
ACBD5	ENSCAPP00000006113	ENSCAPP00000008795	ENSCAPP00000006113	acyl-CoA binding domain containing 5.	annotation not available	0.571
ACBD5	ENSCAPP00000010317	ENSCAPP00000008795	ENSCAPP00000010317	acyl-CoA binding domain containing 5.	annotation not available	0.715
ACBD5	PEX12	ENSCAPP00000008795	ENSCAPP00000009748	acyl-CoA binding domain containing 5.	Peroxisomal biogenesis factor 12.	0.710
ACBD5	PEX13	ENSCAPP00000008795	ENSCAPP00000004053	acyl-CoA binding domain containing 5.	Peroxisomal biogenesis factor 13.	0.750
ACBD5	PEX14	ENSCAPP00000008795	ENSCAPP00000008933	acyl-CoA binding domain containing 5.	Peroxisomal biogenesis factor 14.	0.803
ACBD5	PEX16	ENSCAPP00000008795	ENSCAPP00000005414	acyl-CoA binding domain containing 5.	Peroxisomal biogenesis factor 16.	0.782
ACBD5	PEX2	ENSCAPP00000008795	ENSCAPP00000013113	acyl-CoA binding domain containing 5.	Peroxisomal biogenesis factor 2.	0.645
ACBD5	PEX3	ENSCAPP00000008795	ENSCAPP00000001898	acyl-CoA binding domain containing 5.	Peroxisomal biogenesis factor 3.	0.748
ACBD5	SLC25A17	ENSCAPP00000008795	ENSCAPP00000002109	acyl-CoA binding domain containing 5.	Solute carrier family 25 member 17.	0.661