Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GGA1Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (623 aa)    
Predicted Functional Partners:
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
   
  0.996
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
   
  0.993
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.985
IGF2R
Insulin like growth factor 2 receptor.
    
 
 0.979
BACE1
Beta-secretase 1.
    
 0.975
SORL1
Sortilin related receptor 1.
    
 
 0.968
ENSCAPP00000002664
annotation not available
    
 0.963
CCDC91
Coiled-coil domain containing 91.
    
 
 0.960
ENSCAPP00000000056
annotation not available
    
 
 0.958
CLTC
Clathrin heavy chain.
    
 
 0.944
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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