MORC2 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Coexpression

Experiments

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[Homology]

Score

MORC2

MORC family CW-type zinc finger 2. (655 aa)

Predicted Functional Partners:

ENSCAPP00000001291

0.928

TASOR

0.875

ENSCAPP00000001556

0.860

ENSCAPP00000002778

0.851

TRIM28

0.815

SETDB1

0.767

ENSCAPP00000010925

0.743

ENSCAPP00000013575

0.674

ENSCAPP00000001550

0.650

ENSCAPP00000003097

0.618

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000001291	ENSCAPP00000001550	ENSCAPP00000001291	ENSCAPP00000001550	annotation not available	annotation not available	0.753
ENSCAPP00000001291	ENSCAPP00000002778	ENSCAPP00000001291	ENSCAPP00000002778	annotation not available	annotation not available	0.494
ENSCAPP00000001291	MORC2	ENSCAPP00000001291	ENSCAPP00000005419	annotation not available	MORC family CW-type zinc finger 2.	0.928
ENSCAPP00000001550	ENSCAPP00000001291	ENSCAPP00000001550	ENSCAPP00000001291	annotation not available	annotation not available	0.753
ENSCAPP00000001550	ENSCAPP00000001556	ENSCAPP00000001550	ENSCAPP00000001556	annotation not available	annotation not available	0.732
ENSCAPP00000001550	ENSCAPP00000010925	ENSCAPP00000001550	ENSCAPP00000010925	annotation not available	annotation not available	0.511
ENSCAPP00000001550	ENSCAPP00000013575	ENSCAPP00000001550	ENSCAPP00000013575	annotation not available	annotation not available	0.713
ENSCAPP00000001550	MORC2	ENSCAPP00000001550	ENSCAPP00000005419	annotation not available	MORC family CW-type zinc finger 2.	0.650
ENSCAPP00000001550	SETDB1	ENSCAPP00000001550	ENSCAPP00000012881	annotation not available	SET domain bifurcated histone lysine methyltransferase 1.	0.726
ENSCAPP00000001550	TASOR	ENSCAPP00000001550	ENSCAPP00000006219	annotation not available	Transcription activation suppressor.	0.701
ENSCAPP00000001550	TRIM28	ENSCAPP00000001550	ENSCAPP00000011915	annotation not available	Tripartite motif containing 28.	0.605
ENSCAPP00000001556	ENSCAPP00000001550	ENSCAPP00000001556	ENSCAPP00000001550	annotation not available	annotation not available	0.732
ENSCAPP00000001556	ENSCAPP00000010925	ENSCAPP00000001556	ENSCAPP00000010925	annotation not available	annotation not available	0.533
ENSCAPP00000001556	ENSCAPP00000013575	ENSCAPP00000001556	ENSCAPP00000013575	annotation not available	annotation not available	0.980
ENSCAPP00000001556	MORC2	ENSCAPP00000001556	ENSCAPP00000005419	annotation not available	MORC family CW-type zinc finger 2.	0.860
ENSCAPP00000001556	SETDB1	ENSCAPP00000001556	ENSCAPP00000012881	annotation not available	SET domain bifurcated histone lysine methyltransferase 1.	0.999
ENSCAPP00000001556	TASOR	ENSCAPP00000001556	ENSCAPP00000006219	annotation not available	Transcription activation suppressor.	0.884
ENSCAPP00000001556	TRIM28	ENSCAPP00000001556	ENSCAPP00000011915	annotation not available	Tripartite motif containing 28.	0.553
ENSCAPP00000002778	ENSCAPP00000001291	ENSCAPP00000002778	ENSCAPP00000001291	annotation not available	annotation not available	0.494
ENSCAPP00000002778	MORC2	ENSCAPP00000002778	ENSCAPP00000005419	annotation not available	MORC family CW-type zinc finger 2.	0.851