STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P3H1Prolyl 3-hydroxylase 1. (615 aa)    
Predicted Functional Partners:
ENSCAPP00000011777
annotation not available
   
0.909
PPIC
Peptidylprolyl isomerase C.
   
 0.735
COL1A2
Collagen type I alpha 2 chain.
    
 0.732
ENSCAPP00000016172
annotation not available
    
 0.725
ENSCAPP00000010204
annotation not available
   
 
 0.625
TICRR
TOPBP1 interacting checkpoint and replication regulator.
   
 0.597
P4HB
Prolyl 4-hydroxylase subunit beta.
   
 0.596
WDR19
WD repeat domain 19.
      
 0.568
CEP290
Centrosomal protein 290.
      
 0.566
ENSCAPP00000010318
annotation not available
      
 0.566
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.