Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005437annotation not available (227 aa)    
Predicted Functional Partners:
TRIM55
Tripartite motif containing 55.
   
 
  0.967
TRIM63
Tripartite motif containing 63.
   
  0.966
FLNC
Filamin C.
   
 0.843
STAT3
Signal transducer and activator of transcription 3.
    
 0.793
ENSCAPP00000001832
annotation not available
    
  0.753
CLUAP1
Clusterin associated protein 1.
    
  0.751
IFT81
Intraflagellar transport 81.
     
 0.743
ENSCAPP00000009143
annotation not available
      
 0.741
ENSCAPP00000002289
annotation not available
    
  0.738
IFT57
Intraflagellar transport 57.
     
  0.734
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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