Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005438annotation not available (59 aa)    
Predicted Functional Partners:
ENSCAPP00000011834
annotation not available
    
 0.941
ENSCAPP00000005200
annotation not available
   
 
 0.893
AMFR
Autocrine motility factor receptor.
    
 
 0.881
CHAF1B
Chromatin assembly factor 1 subunit B.
   
 0.832
ENSCAPP00000006059
annotation not available
    
 0.817
ENSCAPP00000008934
annotation not available
    
 0.817
SREBF1
Sterol regulatory element binding transcription factor 1.
    
 0.771
INSIG1
Insulin induced gene 1.
    
  0.768
ERLIN2
ER lipid raft associated 2.
    
 
 0.751
VCP
Valosin containing protein.
   
 
 0.676
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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