STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005439annotation not available (180 aa)    
Predicted Functional Partners:
LCN8
Lipocalin 8.
  
  
 0.730
ENSCAPP00000018140
annotation not available
     
 0.726
ENSCAPP00000017432
annotation not available
  
   
 0.719
LCN10
Lipocalin 10.
   
  
 0.648
CDC73
Cell division cycle 73.
   
 0.614
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.593
C8G
Complement C8 gamma chain.
      
 0.582
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.561
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.561
ENSCAPP00000001869
annotation not available
      
 0.539
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.