Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC2A12Solute carrier family 2 member 12. (582 aa)    
Predicted Functional Partners:
ENSCAPP00000013732
annotation not available
    
  0.669
SLC1A7
Solute carrier family 1 member 7.
      
 0.666
SLC1A6
Solute carrier family 1 member 6.
      
 0.666
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
    
 0.626
MRPS7
Mitochondrial ribosomal protein S7.
    
  0.624
SLC1A1
Solute carrier family 1 member 1.
      
 0.579
ENSCAPP00000006405
annotation not available
      
 0.570
SLFNL1
Schlafen like 1.
    
 0.569
ACSF2
acyl-CoA synthetase family member 2.
      
 0.569
ENSCAPP00000006843
annotation not available
    
 0.569
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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