Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBP1Fructose-bisphosphatase 1. (314 aa)    
Predicted Functional Partners:
ALDOB
Aldolase, fructose-bisphosphate B.
  
 0.966
TALDO1
Transaldolase 1.
  
 
 0.940
TKT
Transketolase.
  
 
 0.932
GPI
Glucose-6-phosphate isomerase.
   
 
 0.931
PFKM
Phosphofructokinase, muscle.
    
 0.929
ALDOC
Aldolase, fructose-bisphosphate C.
  
 0.925
PFKFB3
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3.
   
 
 0.922
ENSCAPP00000018403
annotation not available
  
 0.918
PFKP
Phosphofructokinase, platelet.
    
 0.908
PFKL
Phosphofructokinase, liver type.
    
 0.908
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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