STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMC6Transmembrane channel like 6. (778 aa)    
Predicted Functional Partners:
SLC22A23
Solute carrier family 22 member 23.
    
 
 0.829
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.787
RASA1
RAS p21 protein activator 1.
    
 
 0.759
CIB1
Calcium and integrin binding 1.
    
 0.747
ENSCAPP00000003591
annotation not available
    
 0.719
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
     
 0.699
ENSCAPP00000004558
annotation not available
      
 0.691
TRPC4
Transient receptor potential cation channel subfamily C member 4.
     
 0.690
ENSCAPP00000001261
annotation not available
    
 
 0.688
AZIN2
Antizyme inhibitor 2.
      
 0.685
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.