Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005461annotation not available (27 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.556
GART
annotation not available
     
  0.505
BARD1
BRCA1 associated RING domain 1.
    
 0.484
CD74
CD74 molecule.
  
 
  0.459
ENSCAPP00000008247
annotation not available
  
 
  0.431
KDM2B
Lysine demethylase 2B.
    
  0.418
KDM2A
Lysine demethylase 2A.
    
  0.418
POLR3D
RNA polymerase III subunit D.
  
 
  0.418
ENSCAPP00000013591
annotation not available
    
  0.418
FBXL19
F-box and leucine rich repeat protein 19.
    
  0.418
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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