STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TENT4ATerminal nucleotidyltransferase 4A. (542 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
   
 0.989
ZCCHC8
Zinc finger CCHC-type containing 8.
     
 0.942
ENSCAPP00000001144
annotation not available
     
0.922
ZCCHC14
Zinc finger CCHC-type containing 14.
   
 0.881
ENSCAPP00000017518
annotation not available
    
 0.827
ENSCAPP00000009291
annotation not available
    
   0.805
ENSCAPP00000003591
annotation not available
   
 0.784
EXOSC10
Exosome component 10.
   
 
 0.765
ZCCHC2
Zinc finger CCHC-type containing 2.
   
 0.727
ENSCAPP00000002399
annotation not available
   
 0.725
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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