TENT4A protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

TENT4A

Terminal nucleotidyltransferase 4A. (542 aa)

Predicted Functional Partners:

MTREX

0.995

ENSCAPP00000001144

0.990

ZCCHC8

0.964

EXOSC10

0.921

ZCCHC14

0.869

ENSCAPP00000017518

0.836

ENSCAPP00000017829

0.781

ENSCAPP00000013554

0.771

POLL

0.770

EXOSC5

0.726

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000001144	ENSCAPP00000017518	ENSCAPP00000001144	ENSCAPP00000017518	annotation not available	annotation not available	0.836
ENSCAPP00000001144	ENSCAPP00000017829	ENSCAPP00000001144	ENSCAPP00000017829	annotation not available	annotation not available	0.499
ENSCAPP00000001144	EXOSC10	ENSCAPP00000001144	ENSCAPP00000003839	annotation not available	Exosome component 10.	0.950
ENSCAPP00000001144	EXOSC5	ENSCAPP00000001144	ENSCAPP00000002865	annotation not available	Exosome component 5.	0.891
ENSCAPP00000001144	MTREX	ENSCAPP00000001144	ENSCAPP00000006585	annotation not available	Mtr4 exosome RNA helicase.	0.997
ENSCAPP00000001144	POLL	ENSCAPP00000001144	ENSCAPP00000015966	annotation not available	DNA polymerase lambda.	0.473
ENSCAPP00000001144	TENT4A	ENSCAPP00000001144	ENSCAPP00000005462	annotation not available	Terminal nucleotidyltransferase 4A.	0.990
ENSCAPP00000001144	ZCCHC14	ENSCAPP00000001144	ENSCAPP00000016233	annotation not available	Zinc finger CCHC-type containing 14.	0.898
ENSCAPP00000001144	ZCCHC8	ENSCAPP00000001144	ENSCAPP00000017909	annotation not available	Zinc finger CCHC-type containing 8.	0.957
ENSCAPP00000013554	POLL	ENSCAPP00000013554	ENSCAPP00000015966	annotation not available	DNA polymerase lambda.	0.604
ENSCAPP00000013554	TENT4A	ENSCAPP00000013554	ENSCAPP00000005462	annotation not available	Terminal nucleotidyltransferase 4A.	0.771
ENSCAPP00000017518	ENSCAPP00000001144	ENSCAPP00000017518	ENSCAPP00000001144	annotation not available	annotation not available	0.836
ENSCAPP00000017518	TENT4A	ENSCAPP00000017518	ENSCAPP00000005462	annotation not available	Terminal nucleotidyltransferase 4A.	0.836
ENSCAPP00000017829	ENSCAPP00000001144	ENSCAPP00000017829	ENSCAPP00000001144	annotation not available	annotation not available	0.499
ENSCAPP00000017829	TENT4A	ENSCAPP00000017829	ENSCAPP00000005462	annotation not available	Terminal nucleotidyltransferase 4A.	0.781
EXOSC10	ENSCAPP00000001144	ENSCAPP00000003839	ENSCAPP00000001144	Exosome component 10.	annotation not available	0.950
EXOSC10	EXOSC5	ENSCAPP00000003839	ENSCAPP00000002865	Exosome component 10.	Exosome component 5.	0.999
EXOSC10	MTREX	ENSCAPP00000003839	ENSCAPP00000006585	Exosome component 10.	Mtr4 exosome RNA helicase.	0.999
EXOSC10	TENT4A	ENSCAPP00000003839	ENSCAPP00000005462	Exosome component 10.	Terminal nucleotidyltransferase 4A.	0.921
EXOSC10	ZCCHC14	ENSCAPP00000003839	ENSCAPP00000016233	Exosome component 10.	Zinc finger CCHC-type containing 14.	0.494