ENSCAPP00000005470 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCAPP00000005470

annotation not available (304 aa)

Predicted Functional Partners:

NFKB1

0.990

NFKB2

0.987

CYLD

0.979

TSPEAR

0.925

MYH9

0.883

WHRN

0.878

REL

0.816

ENSCAPP00000016597

0.813

ENSCAPP00000011154

0.800

SLC12A2

0.778

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYLD	ENSCAPP00000005470	ENSCAPP00000005236	ENSCAPP00000005470	CYLD lysine 63 deubiquitinase.	annotation not available	0.979
CYLD	ENSCAPP00000011154	ENSCAPP00000005236	ENSCAPP00000011154	CYLD lysine 63 deubiquitinase.	annotation not available	0.820
CYLD	ENSCAPP00000016597	ENSCAPP00000005236	ENSCAPP00000016597	CYLD lysine 63 deubiquitinase.	annotation not available	0.407
CYLD	NFKB1	ENSCAPP00000005236	ENSCAPP00000005885	CYLD lysine 63 deubiquitinase.	Nuclear factor kappa B subunit 1.	0.819
CYLD	NFKB2	ENSCAPP00000005236	ENSCAPP00000012829	CYLD lysine 63 deubiquitinase.	Nuclear factor kappa B subunit 2.	0.728
ENSCAPP00000005470	CYLD	ENSCAPP00000005470	ENSCAPP00000005236	annotation not available	CYLD lysine 63 deubiquitinase.	0.979
ENSCAPP00000005470	ENSCAPP00000011154	ENSCAPP00000005470	ENSCAPP00000011154	annotation not available	annotation not available	0.800
ENSCAPP00000005470	ENSCAPP00000016597	ENSCAPP00000005470	ENSCAPP00000016597	annotation not available	annotation not available	0.813
ENSCAPP00000005470	MYH9	ENSCAPP00000005470	ENSCAPP00000011794	annotation not available	Myosin heavy chain 9.	0.883
ENSCAPP00000005470	NFKB1	ENSCAPP00000005470	ENSCAPP00000005885	annotation not available	Nuclear factor kappa B subunit 1.	0.990
ENSCAPP00000005470	NFKB2	ENSCAPP00000005470	ENSCAPP00000012829	annotation not available	Nuclear factor kappa B subunit 2.	0.987
ENSCAPP00000005470	REL	ENSCAPP00000005470	ENSCAPP00000014851	annotation not available	REL proto-oncogene, NF-kB subunit.	0.816
ENSCAPP00000005470	SLC12A2	ENSCAPP00000005470	ENSCAPP00000001857	annotation not available	Solute carrier family 12 member 2.	0.778
ENSCAPP00000005470	TSPEAR	ENSCAPP00000005470	ENSCAPP00000001178	annotation not available	Thrombospondin type laminin G domain and EAR repeats.	0.925
ENSCAPP00000005470	WHRN	ENSCAPP00000005470	ENSCAPP00000000774	annotation not available	Whirlin.	0.878
ENSCAPP00000011154	CYLD	ENSCAPP00000011154	ENSCAPP00000005236	annotation not available	CYLD lysine 63 deubiquitinase.	0.820
ENSCAPP00000011154	ENSCAPP00000005470	ENSCAPP00000011154	ENSCAPP00000005470	annotation not available	annotation not available	0.800
ENSCAPP00000011154	ENSCAPP00000016597	ENSCAPP00000011154	ENSCAPP00000016597	annotation not available	annotation not available	0.998
ENSCAPP00000011154	NFKB1	ENSCAPP00000011154	ENSCAPP00000005885	annotation not available	Nuclear factor kappa B subunit 1.	0.998
ENSCAPP00000011154	NFKB2	ENSCAPP00000011154	ENSCAPP00000012829	annotation not available	Nuclear factor kappa B subunit 2.	0.997