Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRABP1Cellular retinoic acid binding protein 1. (132 aa)    
Predicted Functional Partners:
RARA
Retinoic acid receptor alpha.
    
 0.763
RXRB
Retinoid X receptor beta.
    
 0.759
TTR
Transthyretin.
   
 
 0.758
ENSCAPP00000002351
annotation not available
    
 0.661
FABP2
Fatty acid binding protein 2.
  
  
 0.653
RARB
Retinoic acid receptor beta.
    
 0.645
ENSCAPP00000010601
annotation not available
     
 0.622
RARG
Retinoic acid receptor gamma.
    
 0.621
CYP26B1
Cytochrome P450 family 26 subfamily B member 1.
     
 0.598
IFT81
Intraflagellar transport 81.
      
 0.598
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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