STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRABP1Cellular retinoic acid binding protein 1. (132 aa)    
Predicted Functional Partners:
FABP2
Fatty acid binding protein 2.
  
  
 0.662
RARA
Retinoic acid receptor alpha.
    
 0.653
RARB
Retinoic acid receptor beta.
    
 0.643
FABP6
Fatty acid binding protein 6.
     
 0.577
RARG
Retinoic acid receptor gamma.
    
 0.564
LUM
Lumican.
   
  
 0.561
RXRB
Retinoid X receptor beta.
    
 0.560
RXRA
Retinoid X receptor alpha.
    
 0.555
PTPRZ1
Protein tyrosine phosphatase receptor type Z1.
      
 0.553
PPARD
Peroxisome proliferator activated receptor delta.
    
 0.549
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.