STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOCDMyocardin. (928 aa)    
Predicted Functional Partners:
SRF
Serum response factor.
    
 0.937
MAP2K4
Mitogen-activated protein kinase kinase 4.
   
 0.771
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.767
MOB1A
MOB kinase activator 1A.
    
 0.749
ENSCAPP00000002279
annotation not available
   
 0.749
MAP2K1
Mitogen-activated protein kinase kinase 1.
   
 0.749
MAP2K5
Mitogen-activated protein kinase kinase 5.
   
 0.749
ENSCAPP00000015096
annotation not available
    
 0.703
SHANK3
SH3 and multiple ankyrin repeat domains 3.
    
 0.700
SHANK1
SH3 and multiple ankyrin repeat domains 1.
    
 0.700
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.