STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOCDMyocardin. (928 aa)    
Predicted Functional Partners:
SRF
Serum response factor.
    
 0.997
SHANK3
SH3 and multiple ankyrin repeat domains 3.
    
 0.862
SHANK1
SH3 and multiple ankyrin repeat domains 1.
    
 0.862
CNN2
Calponin 2.
   
 
 0.842
MOB1A
MOB kinase activator 1A.
    
 0.747
ACTG2
Actin gamma 2, smooth muscle.
   
 0.747
MAP2K4
Mitogen-activated protein kinase kinase 4.
    
 0.715
ENSCAPP00000002279
annotation not available
    
 0.713
MAP2K1
Mitogen-activated protein kinase kinase 1.
    
 0.713
MAP2K5
Mitogen-activated protein kinase kinase 5.
    
 0.713
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.