STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN15Calpain 15. (1165 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
 0.842
ZNF236
Zinc finger protein 236.
    
 0.664
ENSCAPP00000000298
annotation not available
    
 
 0.647
PEF1
penta-EF-hand domain containing 1.
   
 0.644
PDCD6
Programmed cell death 6.
   
 0.644
GCA
Grancalcin.
   
 0.643
SRI
Sorcin.
   
 0.643
ENSCAPP00000006804
annotation not available
   
 
 0.609
FOXP2
Forkhead box P2.
   
  
 0.566
P2RY1
Purinergic receptor P2Y1.
      
 0.552
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.