Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARL6ADP ribosylation factor like GTPase 6. (186 aa)    
Predicted Functional Partners:
ENSCAPP00000004998
annotation not available
    
 0.970
CYTH2
Cytohesin 2.
    
 0.970
CYTH4
Cytohesin 4.
    
 0.885
COPB1
Coatomer protein complex subunit beta 1.
   
 0.882
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
    
 0.869
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.868
BBS7
Bardet-Biedl syndrome 7.
   
 0.865
NCKAP1
NCK associated protein 1.
   
  0.861
ENSCAPP00000011207
annotation not available
   
  0.861
CYFIP2
Cytoplasmic FMR1 interacting protein 2.
    
  0.857
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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