Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005501annotation not available (106 aa)    
Predicted Functional Partners:
ENSCAPP00000013402
annotation not available
   
 
 0.977
TSC22D4
TSC22 domain family member 4.
    
 
 0.943
ENSCAPP00000007776
annotation not available
    
 
 0.933
TSC22D1
TSC22 domain family member 1.
 
      0.889
CA10
Carbonic anhydrase 10.
    
   0.883
NRBP2
Nuclear receptor binding protein 2.
    
 
 0.804
ARAF
A-Raf proto-oncogene, serine/threonine kinase.
    
 0.734
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
    
 0.734
WWP1
WW domain containing E3 ubiquitin protein ligase 1.
    
 0.682
SGK1
Serum/glucocorticoid regulated kinase 1.
   
 0.675
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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