STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP350Centrosomal protein 350. (2325 aa)    
Predicted Functional Partners:
ENSCAPP00000010813
annotation not available
   
  0.831
CEP19
Centrosomal protein 19.
    
 
 0.744
PHIP
Pleckstrin homology domain interacting protein.
   
 
  0.741
CYLD
CYLD lysine 63 deubiquitinase.
    
 0.708
ENSCAPP00000002117
annotation not available
   
   0.704
BUB3
BUB3 mitotic checkpoint protein.
    
 0.640
ENSCAPP00000000974
annotation not available
    
 0.625
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
    0.592
CKAP5
Cytoskeleton associated protein 5.
    
 
 0.586
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.565
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.