Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005504annotation not available (582 aa)    
Predicted Functional Partners:
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 0.999
RUVBL2
RuvB like AAA ATPase 2.
    
 0.998
EP400
E1A binding protein p400.
    
 0.998
ENSCAPP00000012893
annotation not available
    
 0.998
ENSCAPP00000014420
annotation not available
   
 0.998
YEATS4
YEATS domain containing 4.
    
 0.998
MEAF6
MYST/Esa1 associated factor 6.
    
 0.998
VPS72
Vacuolar protein sorting 72 homolog.
    
 0.998
ING3
Inhibitor of growth family member 3.
    
 0.998
ACTL6A
Actin like 6A.
   
 0.997
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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