STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR1Early growth response 1. (430 aa)    
Predicted Functional Partners:
EGR2
Early growth response 2.
   
 
0.955
FOS
Fos proto-oncogene, AP-1 transcription factor subunit.
   
 0.944
MAPK3
Mitogen-activated protein kinase 3.
   
 0.939
CREBBP
CREB binding protein.
    
 0.927
EP300
E1A binding protein p300.
    
 0.923
ENSCAPP00000003915
annotation not available
   
 0.916
ENSCAPP00000005288
annotation not available
   
 0.863
NAB1
NGFI-A binding protein 1.
    
 0.859
MAPK7
Mitogen-activated protein kinase 7.
   
 0.771
TP53
Tumor protein p53.
    
 0.761
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.