STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NALCNSodium leak channel, non-selective. (1670 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.999
UNC80
Unc-80 homolog, NALCN channel complex subunit.
   
 0.991
ENSCAPP00000002573
annotation not available
   
 
 0.966
CACNB1
Calcium voltage-gated channel auxiliary subunit beta 1.
    
 0.762
CACNB2
Calcium voltage-gated channel auxiliary subunit beta 2.
    
 0.762
ENSCAPP00000006530
annotation not available
    
 0.762
CACNB3
Calcium voltage-gated channel auxiliary subunit beta 3.
    
 0.762
SCN1B
Sodium voltage-gated channel beta subunit 1.
    
 0.758
WDR35
WD repeat domain 35.
    
 0.748
IFT122
Intraflagellar transport 122.
   
 0.742
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.