LMAN1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LMAN1

Lectin, mannose binding 1. (366 aa)

Predicted Functional Partners:

MCFD2

0.999

EMC3

0.905

ENSCAPP00000011033

0.886

SSR1

0.883

ENSCAPP00000008248

0.861

ENSCAPP00000001689

0.854

SEC16A

0.842

SEC24B

0.831

ENSCAPP00000010370

0.830

TMED10

0.827

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EMC3	LMAN1	ENSCAPP00000013877	ENSCAPP00000005510	ER membrane protein complex subunit 3.	Lectin, mannose binding 1.	0.905
ENSCAPP00000001689	ENSCAPP00000008248	ENSCAPP00000001689	ENSCAPP00000008248	annotation not available	annotation not available	0.887
ENSCAPP00000001689	ENSCAPP00000010370	ENSCAPP00000001689	ENSCAPP00000010370	annotation not available	annotation not available	0.669
ENSCAPP00000001689	ENSCAPP00000011033	ENSCAPP00000001689	ENSCAPP00000011033	annotation not available	annotation not available	0.727
ENSCAPP00000001689	LMAN1	ENSCAPP00000001689	ENSCAPP00000005510	annotation not available	Lectin, mannose binding 1.	0.854
ENSCAPP00000001689	MCFD2	ENSCAPP00000001689	ENSCAPP00000010307	annotation not available	Multiple coagulation factor deficiency 2.	0.604
ENSCAPP00000001689	SEC16A	ENSCAPP00000001689	ENSCAPP00000002212	annotation not available	SEC16 homolog A, endoplasmic reticulum export factor.	0.537
ENSCAPP00000001689	SEC24B	ENSCAPP00000001689	ENSCAPP00000008033	annotation not available	SEC24 homolog B, COPII coat complex component.	0.774
ENSCAPP00000001689	TMED10	ENSCAPP00000001689	ENSCAPP00000006917	annotation not available	Transmembrane p24 trafficking protein 10.	0.999
ENSCAPP00000008248	ENSCAPP00000001689	ENSCAPP00000008248	ENSCAPP00000001689	annotation not available	annotation not available	0.887
ENSCAPP00000008248	ENSCAPP00000010370	ENSCAPP00000008248	ENSCAPP00000010370	annotation not available	annotation not available	0.705
ENSCAPP00000008248	ENSCAPP00000011033	ENSCAPP00000008248	ENSCAPP00000011033	annotation not available	annotation not available	0.997
ENSCAPP00000008248	LMAN1	ENSCAPP00000008248	ENSCAPP00000005510	annotation not available	Lectin, mannose binding 1.	0.861
ENSCAPP00000008248	MCFD2	ENSCAPP00000008248	ENSCAPP00000010307	annotation not available	Multiple coagulation factor deficiency 2.	0.643
ENSCAPP00000008248	SEC16A	ENSCAPP00000008248	ENSCAPP00000002212	annotation not available	SEC16 homolog A, endoplasmic reticulum export factor.	0.966
ENSCAPP00000008248	SEC24B	ENSCAPP00000008248	ENSCAPP00000008033	annotation not available	SEC24 homolog B, COPII coat complex component.	0.998
ENSCAPP00000008248	TMED10	ENSCAPP00000008248	ENSCAPP00000006917	annotation not available	Transmembrane p24 trafficking protein 10.	0.818
ENSCAPP00000010370	ENSCAPP00000001689	ENSCAPP00000010370	ENSCAPP00000001689	annotation not available	annotation not available	0.669
ENSCAPP00000010370	ENSCAPP00000008248	ENSCAPP00000010370	ENSCAPP00000008248	annotation not available	annotation not available	0.705
ENSCAPP00000010370	ENSCAPP00000011033	ENSCAPP00000010370	ENSCAPP00000011033	annotation not available	annotation not available	0.709