Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZRANB2Zinc finger RANBP2-type containing 2. (316 aa)    
Predicted Functional Partners:
PIP4K2B
Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.
    
   0.957
ENSCAPP00000003915
annotation not available
      
 0.949
RPL32
Ribosomal protein L32.
      
 0.949
ENSCAPP00000000385
annotation not available
   
 0.948
ENSCAPP00000015458
annotation not available
    
 
 0.937
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.929
PIP4K2A
Phosphatidylinositol-5-phosphate 4-kinase type 2 alpha.
    
   0.903
PIP4K2C
Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma.
    
   0.899
ENSCAPP00000010105
annotation not available
      
 0.889
ENSCAPP00000005085
annotation not available
   
   0.842
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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