STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZRANB2Zinc finger RANBP2-type containing 2. (316 aa)    
Predicted Functional Partners:
ENSCAPP00000000385
annotation not available
   
 0.752
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.740
ENSCAPP00000017572
annotation not available
   
 0.682
TAF12
TATA-box binding protein associated factor 12.
   
  0.676
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.671
ENSCAPP00000003691
annotation not available
   
 0.660
ENSCAPP00000014392
annotation not available
   
 0.660
TAF5
TATA-box binding protein associated factor 5.
    
  0.645
TAF5L
TATA-box binding protein associated factor 5 like.
    
  0.645
GTF2F1
General transcription factor IIF subunit 1.
     
 0.617
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.