STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGAT1Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase. (447 aa)    
Predicted Functional Partners:
MAN1A1
Mannosidase alpha class 1A member 1.
    
 0.941
MAN1A2
Mannosidase alpha class 1A member 2.
    
 0.941
MAN1C1
Mannosidase alpha class 1C member 1.
    
 0.941
MAN2A1
Mannosidase alpha class 2A member 1.
     
 0.937
MAN1B1
Mannosidase alpha class 1B member 1.
     
 0.880
ENSCAPP00000013013
annotation not available
     
 0.864
ENSCAPP00000005425
annotation not available
     
 0.731
POMGNT1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
     
0.700
FAM3C
Family with sequence similarity 3 member C.
     
 0.700
MAN2B1
Mannosidase alpha class 2B member 1.
   
 
 0.689
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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