Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRWD1Glutamate rich WD repeat containing 1. (329 aa)    
Predicted Functional Partners:
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.991
DDB1
Damage specific DNA binding protein 1.
    
 0.984
WDR36
WD repeat domain 36.
   
 
 0.981
BOP1
BOP1 ribosomal biogenesis factor.
   
 
 0.981
DDX18
DEAD-box helicase 18.
   
 
 0.978
POLR1E
RNA polymerase I subunit E.
   
   0.964
NOL10
Nucleolar protein 10.
   
 
 0.961
ENSCAPP00000014188
annotation not available
   
 0.961
WDR12
WD repeat domain 12.
   
 0.961
DDX56
DEAD-box helicase 56.
   
 
 0.959
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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