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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASTOR1Cytosolic arginine sensor for mTORC1 subunit 1. (280 aa)    
Predicted Functional Partners:
MIOS
Meiosis regulator for oocyte development.
    
 0.947
WDR59
WD repeat domain 59.
    
 0.936
WDR24
WD repeat domain 24.
    
 0.931
SEH1L
SEH1 like nucleoporin.
     
 0.930
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
     
 0.910
METTL25
Methyltransferase like 25.
    
 0.888
ENSCAPP00000014927
annotation not available
  
  
0.813
NPRL2
NPR2 like, GATOR1 complex subunit.
     
 0.810
NPRL3
NPR3 like, GATOR1 complex subunit.
     
 0.810
BMT2
Base methyltransferase of 25S rRNA 2 homolog.
     
 0.809
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.