STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005526annotation not available (166 aa)    
Predicted Functional Partners:
RPL30
Ribosomal protein L30.
   
 0.996
ENSCAPP00000004779
annotation not available
   
 0.995
ENSCAPP00000018483
annotation not available
  
 0.995
RPL8
Ribosomal protein L8.
  
 0.994
RPL5
Ribosomal protein L5.
  
 0.994
RPL31
Ribosomal protein L31.
  
 0.994
RPL10A
Ribosomal protein L10a.
  
 0.994
RPL23
Ribosomal protein L23.
  
 0.994
ENSCAPP00000017536
annotation not available
  
 0.994
RPL3
Ribosomal protein L3.
  
 0.993
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.