Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZFYVE9Zinc finger FYVE-type containing 9. (1033 aa)    
Predicted Functional Partners:
ENSCAPP00000002730
annotation not available
    
 0.998
SMAD2
SMAD family member 2.
    
 0.998
TGFBR1
Transforming growth factor beta receptor 1.
   
 0.948
ENSCAPP00000013384
annotation not available
    
  0.917
PTPN23
Protein tyrosine phosphatase non-receptor type 23.
   
 
 0.898
ENSCAPP00000000802
annotation not available
    
  0.871
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
  0.871
SMAD4
SMAD family member 4.
    
 0.850
ENSCAPP00000000056
annotation not available
    
   0.808
ENSCAPP00000008686
annotation not available
    
 0.744
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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