STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STRA6Stimulated by retinoic acid 6. (609 aa)    
Predicted Functional Partners:
RBP4
Retinol binding protein 4.
     
 0.857
RBP1
Retinol binding protein 1.
     
 0.823
TTR
Transthyretin.
   
 0.790
SEC24B
SEC24 homolog B, COPII coat complex component.
    
 0.653
EPHA1
EPH receptor A1.
    
 0.620
ECI2
enoyl-CoA delta isomerase 2.
    
  0.610
MYLK
Myosin light chain kinase.
    
 0.609
ENSCAPP00000017181
annotation not available
   
 0.605
GAK
Cyclin G associated kinase.
   
 0.588
ENSCAPP00000013876
annotation not available
    
  0.586
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.