Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PET100PET100 cytochrome c oxidase chaperone. (67 aa)    
Predicted Functional Partners:
ENSCAPP00000009147
annotation not available
    
 
 0.875
PUM2
Pumilio RNA binding family member 2.
    
 
 0.875
PCP2
Purkinje cell protein 2.
      
 0.705
PNKD
PNKD metallo-beta-lactamase domain containing.
   
 
 0.629
IMMT
Inner membrane mitochondrial protein.
    
 
 0.622
PCBP2
poly(rC) binding protein 2.
      
 0.617
ENSCAPP00000010712
annotation not available
      
 0.572
ENSCAPP00000003097
annotation not available
      
 0.571
ENSCAPP00000009423
annotation not available
   
  
 0.570
ACAA2
acetyl-CoA acyltransferase 2.
   
    0.570
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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