Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOLH1Folate hydrolase 1. (694 aa)    
Predicted Functional Partners:
RIMKLA
Ribosomal modification protein rimK like family member A.
     
 0.929
ASPA
Aspartoacylase.
   
 
 0.923
ENSCAPP00000016502
annotation not available
     
 0.916
RIMKLB
Ribosomal modification protein rimK like family member B.
     
 0.915
ENSCAPP00000018460
annotation not available
    
   0.809
ENSCAPP00000011386
annotation not available
    
 0.731
ACY3
Aminoacylase 3.
     
 0.693
EPOR
Erythropoietin receptor.
    
 0.681
NAALAD2
N-acetylated alpha-linked acidic dipeptidase 2.
     
  0.653
SLC46A1
Solute carrier family 46 member 1.
      
 0.621
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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